Matlab Tutorials

Matlab Introduction
Odes and Stochastics with Matlab
Image Analysis with Matlab

Images for analysis

2 images

Images of a growing colony of E. coli

100X graticule and picture of E. coli cells

Optical trap with bead

Fly embryo

 

Data from the microscopy lab

Monday 1

Tuesday 1

Wednesday 1

Thursday 1

Friday 1

Monday 2

Tuesday 2

 

Codes

Monday 1:

Monday 1 - measuring E. coli and estimating the growth rate

Tuesday 1:

Tuesday 1 - Project day 1 and Taylor expansion of cos(x)

Wednesday 1:

Wednesday 1 - Project day 2, solution to diffusion equation, Rob's random walk

Thursday 1:

Thursday 1 - Project day 3, predicting gene regulation with statistical mechanics

Friday 1:

Friday 1 - Spring constant of optical trap, Hill functions, Genetic switch.

Monday 2:

Monday 2 - Measuing furrow position and Project day 4.

Tuesday 2:

Tuesday 2 - Genetic oscillator.

Wednesday 2:

Wednesday 2 - Microtubule filament growth.